SRR7182553 (PRJNA472015)

Processing Status: Completed

General Details

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Sample Name GSM3146282
Organism Homo sapiens
Release Date 5/2018

Sample Links

Run Details

Spots 29992819
Total Bases 1499640950
Total Bases 1499640950

Repository Details

SRA SRR7182553
ENA SRR7182553
BioProject PRJNA472015

Experiment Details

Title ribosome footprints_ltm_ifn_vir

Sample Details

Run Accession SRR7182553
Total Number Of Spots (Original File)) 29992819
Total Number Of Bases (Original File) 1499640950
Average Read Length 50
Original File Size (Mb) 598
Experiment Id SRX4099352
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2500
Sra Project Accession (Srp) SRP148422
Pubmed Id 30673779
Sample SRS3315537
Biosample SAMN09223521
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name GSM3146282
Center Name GEO
Submission SRA706809
Month 5
Year 2018
Author Machkovech
Sample Source A549 cells
Sample Title ribosome footprints_ltm_ifn_vir
Library-Type Ribo-Seq
Inhibitor Lactimidomycin
Tissue Lung
Cell-Line A549
Infected influenza virus mixture of low and high CTG NP (reassortant A/PeurtoRico/1934 (PA, PB1, PB2) and A/WSN/1933 (M, NS, HA, NA) and either low or high CTG PR8 NP)
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR7182553 Homo sapiens A549 cells A549 Ribo-Seq Lactimidomycin
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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