SRR788074 (PRJNA193543)
Processing Status: Completed
General Details
| Sample Name | GSM1103180 |
|---|---|
| Organism | Saccharomyces cerevisiae |
| Release Date | 7/2015 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
| Visit GWIPS-viz |
Run Details
| Spots | 17756997 |
|---|---|
| Total Bases | 621494895 |
| Total Bases | 621494895 |
Repository Details
| SRA | SRR788074 |
|---|---|
| ENA | SRR788074 |
| BioProject | PRJNA193543 |
Experiment Details
| Title | Δuba4 Ribosome Footprint 1 |
|---|
Sample Details
| Run Accession | SRR788074 |
|---|---|
| Total Number Of Spots (Original File)) | 17756997 |
| Total Number Of Bases (Original File) | 621494895 |
| Average Read Length | 35 |
| Original File Size (Mb) | 342 |
| Experiment Id | SRX252835 |
| Library Strategy | RNA-Seq |
| Library Selection | size fractionation |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina Genome Analyzer IIx |
| Sra Project Accession (Srp) | SRP019833 |
| Pubmed Id | 23935536 |
| Sample | SRS403039 |
| Biosample | SAMN01985035 |
| Sample Type | simple |
| Organism Taxid | 4932 |
| Organism | Saccharomyces cerevisiae |
| Sample Name | GSM1103180 |
| Center Name | GEO |
| Submission | SRA069892 |
| Month | 7 |
| Year | 2015 |
| Author | Zinshteyn |
| Sample Source | YWG271 |
| Sample Title | Δuba4 Ribosome Footprint 1 |
| Library-Type | Ribo-Seq |
| Replicate-Number | 1.0 |
| Condition | Test |
| Inhibitor | Cycloheximide |
| Timepoint | Before lysis |
| Strain | BY4741 |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR788074 | Saccharomyces cerevisiae | YWG271 | Ribo-Seq | Cycloheximide |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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