SRR7883748 (PRJNA477831)

Processing Status: Completed

General Details

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Sample Name GSM3396990
Organism Homo sapiens
Release Date 3/2019

Sample Links

Run Details

Spots 1000000
Total Bases 36628349
Total Bases 36628349

Repository Details

SRA SRR7883748
ENA SRR7883748
BioProject PRJNA477831

Experiment Details

Title qc_sample_ipsc1_low_rnase

Sample Details

Run Accession SRR7883748
Total Number Of Spots (Original File)) 1000000
Total Number Of Bases (Original File) 36628349
Average Read Length 36
Original File Size (Mb) 15
Experiment Id SRX4721979
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model NextSeq 500
Sra Project Accession (Srp) SRP151279
Pubmed Id 30590705
Sample SRS3807064
Biosample SAMN10097088
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name GSM3396990
Center Name GEO
Submission SRA728057
Month 3
Year 2019
Author Liu
Sample Source iPSC
Sample Title qc_sample_ipsc1_low_rnase
Library-Type Ribo-Seq
Condition Low
Inhibitor Cycloheximide
Cell-Line iPSC
Strain Patient 1
Genotype Fragile X Syndrome
Nucelase Used 20ng RNase A + 12U RNase T1/A260
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR7883748 Homo sapiens iPSC iPSC Ribo-Seq Cycloheximide
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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