SRR7956053 (PRJNA494404)
Processing Status: Completed
General Details
| Sample Name | GSM3414922 |
|---|---|
| Organism | Mus musculus |
| Release Date | 12/2018 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 52822884 |
|---|---|
| Total Bases | 4014539184 |
| Total Bases | 4014539184 |
Repository Details
| SRA | SRR7956053 |
|---|---|
| ENA | SRR7956053 |
| BioProject | PRJNA494404 |
Experiment Details
| Title | RibosomeProfiling_Rep2_CHX_LPS |
|---|
Sample Details
| Run Accession | SRR7956053 |
|---|---|
| Total Number Of Spots (Original File)) | 52822884 |
| Total Number Of Bases (Original File) | 4014539184 |
| Average Read Length | 76 |
| Original File Size (Mb) | 1336 |
| Experiment Id | SRX4789734 |
| Library Strategy | OTHER |
| Library Selection | other |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina HiSeq 2000 |
| Sra Project Accession (Srp) | SRP163147 |
| Pubmed Id | 30542152 |
| Sample | SRS3869050 |
| Biosample | SAMN10166841 |
| Sample Type | simple |
| Organism Taxid | 10090 |
| Organism | Mus musculus |
| Sample Name | GSM3414922 |
| Center Name | GEO |
| Submission | SRA787914 |
| Month | 12 |
| Year | 2018 |
| Author | Jackson |
| Sample Source | Bone Marrow Derived Macrophages |
| Sample Title | RibosomeProfiling_Rep2_CHX_LPS |
| Library-Type | Ribo-Seq |
| Replicate-Number | 2.0 |
| Inhibitor | Cycloheximide |
| Tissue | Bone |
| Cell-Line | Macrophage |
| Strain | C57BL/6 |
| Genotype | WT |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR7956053 | Mus musculus | Bone Marrow Derived Macrophages | Macrophage | Ribo-Seq | Cycloheximide |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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