SRR8070862 (PRJNA497255)
Processing Status: Completed
General Details
| Sample Name | GSM3434466 |
|---|---|
| Organism | Homo sapiens |
| Release Date | 6/2019 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 54496339 |
|---|---|
| Total Bases | 2779313289 |
| Total Bases | 2779313289 |
Repository Details
| SRA | SRR8070862 |
|---|---|
| ENA | SRR8070862 |
| BioProject | PRJNA497255 |
Experiment Details
| Title | U2OS_siCDK12_A_RPF |
|---|
Sample Details
| Run Accession | SRR8070862 |
|---|---|
| Total Number Of Spots (Original File)) | 54496339 |
| Total Number Of Bases (Original File) | 2779313289 |
| Average Read Length | 51 |
| Original File Size (Mb) | 883 |
| Experiment Id | SRX4898853 |
| Library Name | 0.0 |
| Library Strategy | OTHER |
| Library Selection | other |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina HiSeq 2500 |
| Sra Project Accession (Srp) | SRP165989 |
| Pubmed Id | <NA> |
| Sample | SRS3945339 |
| Biosample | SAMN10251804 |
| Sample Type | simple |
| Organism Taxid | 9606 |
| Organism | Homo sapiens |
| Sample Name | GSM3434466 |
| Center Name | GEO |
| Submission | SRA795385 |
| Month | 6 |
| Year | 2019 |
| Author | Choi |
| Sample Source | U2OS cells |
| Sample Title | U2OS_siCDK12_A_RPF |
| Library-Type | Ribo-Seq |
| Replicate-Number | ANA |
| Condition | Test |
| Inhibitor | Cycloheximide |
| Timepoint | NANA |
| Tissue | Bone |
| Cell-Line | U2OS |
| Cellular-Compartment | 0.0 |
| Stage | 0.0 |
| Gene | 0.0 |
| Sex | 0.0 |
| Strain | 0.0 |
| Age | 0.0 |
| Infected | 0.0 |
| Disease | 0.0 |
| Genotype | 0.0 |
| Feeding | 0.0 |
| Temperature | 0.0 |
| Sirna | 0.0 |
| Sgrna | 0.0 |
| Shrna | 0.0 |
| Plasmid | 0.0 |
| Growth-Condition | 0.0 |
| Stress | 0.0 |
| Cancer | 0.0 |
| Microrna | 0.0 |
| Individual | 0.0 |
| Antibody Used | 0.0 |
| Ethnicity | 0.0 |
| Dose | 0.0 |
| Stimulation | 0.0 |
| Host Organism | 0.0 |
| Unique Molecular Identifier (Umi) | 0.0 |
| Adapter Sequence | 0.0 |
| Mode Of Separation | 0.0 |
| Mode Of Rrna Depletion | 0.0 |
| Barcode Information | 0.0 |
| Nucelase Used | 0.0 |
| Kit Used | 0.0 |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR8070862 | Homo sapiens | U2OS cells | U2OS | Ribo-Seq | Cycloheximide |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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