SRR826800 (PRJNA197001)
Processing Status: Not Yet Started
General Details
| Sample Name | GSM1122210 |
|---|---|
| Organism | Mus musculus |
| Release Date | 9/2013 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 101447699 |
|---|---|
| Total Bases | 5072384950 |
| Total Bases | 5072384950 |
Repository Details
| SRA | SRR826800 |
|---|---|
| ENA | SRR826800 |
| BioProject | PRJNA197001 |
Experiment Details
| Title | A37G Ribo-Seq 2.0 ppm Se |
|---|
Sample Details
| Run Accession | SRR826800 |
|---|---|
| Total Number Of Spots (Original File)) | 101447699 |
| Total Number Of Bases (Original File) | 5072384950 |
| Average Read Length | 50 |
| Original File Size (Mb) | 3628 |
| Experiment Id | SRX265143 |
| Library Name | 0.0 |
| Library Strategy | RNA-Seq |
| Library Selection | cDNA |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina HiSeq 2000 |
| Sra Project Accession (Srp) | SRP021058 |
| Pubmed Id | 23696641 |
| Sample | SRS412372 |
| Biosample | SAMN02045518 |
| Sample Type | simple |
| Organism Taxid | 10090 |
| Organism | Mus musculus |
| Sample Name | GSM1122210 |
| Center Name | GEO |
| Submission | SRA073403 |
| Month | 9 |
| Year | 2013 |
| Author | Howard |
| Sample Source | Liver |
| Sample Title | A37G Ribo-Seq 2.0 ppm Se |
| Library-Type | Ribo-Seq |
| Replicate-Number | 0.0 |
| Condition | 0.0 |
| Inhibitor | 0.0 |
| Timepoint | NANA |
| Tissue | Liver |
| Cell-Line | 0.0 |
| Cellular-Compartment | 0.0 |
| Stage | 0.0 |
| Gene | Contains 20 copies TrspA37G |
| Sex | 0.0 |
| Strain | FVB/N/TrspA37G |
| Age | 3 weeks |
| Infected | 0.0 |
| Disease | 0.0 |
| Genotype | 0.0 |
| Feeding | 0.0 |
| Temperature | 0.0 |
| Sirna | 0.0 |
| Sgrna | 0.0 |
| Shrna | 0.0 |
| Plasmid | 0.0 |
| Growth-Condition | 0.0 |
| Stress | 0.0 |
| Cancer | 0.0 |
| Microrna | 0.0 |
| Individual | 0.0 |
| Antibody Used | 0.0 |
| Ethnicity | 0.0 |
| Dose | 0.0 |
| Stimulation | 0.0 |
| Host Organism | 0.0 |
| Unique Molecular Identifier (Umi) | 0.0 |
| Adapter Sequence | 0.0 |
| Mode Of Separation | 0.0 |
| Mode Of Rrna Depletion | 0.0 |
| Barcode Information | 0.0 |
| Nucelase Used | 0.0 |
| Kit Used | 0.0 |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR826800 | Mus musculus | Liver | 0.0 | Ribo-Seq | 0.0 |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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