SRR8353550 (PRJNA510796)
General Details
| Sample Name | GSM3521113 |
|---|---|
| Organism | Arabidopsis thaliana |
| Release Date | 12/2020 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 155654722 |
|---|---|
| Total Bases | 7938390822 |
| Total Bases | 7938390822 |
Repository Details
| SRA | SRR8353550 |
|---|---|
| ENA | SRR8353550 |
| BioProject | PRJNA510796 |
Experiment Details
| Title | RF-AvrRpt2 Rep2 (C) |
|---|
Sample Details
| Run Accession | SRR8353550 |
|---|---|
| Total Number Of Spots (Original File)) | 155654722 |
| Total Number Of Bases (Original File) | 7938390822 |
| Average Read Length | 51 |
| Original File Size (Mb) | 2500 |
| Experiment Id | SRX5164412 |
| Library Strategy | OTHER |
| Library Selection | other |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina HiSeq 2000 |
| Sra Project Accession (Srp) | SRP173921 |
| Pubmed Id | <NA> |
| Sample | SRS4174076 |
| Biosample | SAMN10615034 |
| Sample Type | simple |
| Organism Taxid | 3702 |
| Organism | Arabidopsis thaliana |
| Sample Name | GSM3521113 |
| Center Name | GEO |
| Submission | SRA824990 |
| Month | 12 |
| Year | 2020 |
| Sample Source | RF-AvrRpt2 (C) |
| Sample Title | RF-AvrRpt2 Rep2 (C) |
| Replicate-Number | 2.0 |
| Tissue | Leaf |
| Cellular-Compartment | ribosomal associated mRNA |
| Gene | 35S:uORFsTBF1-LUC |
| Genotype | WT background |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR8353550 | Arabidopsis thaliana | RF-AvrRpt2 (C) |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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