SRR836196 (PRJNA200706)

Processing Status: Completed

General Details

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Sample Name GSM1131534
Organism Danio rerio
Release Date 5/2013

Sample Links

Run Details

Spots 122889739
Total Bases 5407148516
Total Bases 5407148516

Repository Details

SRA SRR836196
ENA SRR836196
BioProject PRJNA200706

Experiment Details

Title 20120724_RPF-Seq_Shield

Sample Details

Run Accession SRR836196
Total Number Of Spots (Original File)) 122889739
Total Number Of Bases (Original File) 5407148516
Average Read Length 44
Original File Size (Mb) 3801
Experiment Id SRX272885
Library Strategy RNA-Seq
Library Selection size fractionation
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2000
Sra Project Accession (Srp) SRP021915
Pubmed Id 23698349
Sample SRS417391
Biosample SAMN02087561
Sample Type simple
Organism Taxid 7955
Organism Danio rerio
Sample Name GSM1131534
Center Name GEO
Submission SRA075002
Month 5
Year 2013
Author Chew
Sample Source Whole embryos
Sample Title 20120724_RPF-Seq_Shield
Library-Type Ribo-Seq
Condition Control
Inhibitor Cycloheximide
Timepoint 6h
Tissue Embryo
Stage Shield
Strain TL/AB
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR836196 Danio rerio Whole embryos Ribo-Seq Cycloheximide
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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