SRR8413894 (PRJNA489275)
Processing Status: Completed
General Details
| Sample Name | GSM3553910 |
|---|---|
| Organism | Escherichia coli |
| Release Date | 2/2019 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 47827088 |
|---|---|
| Total Bases | 1628014522 |
| Total Bases | 1628014522 |
Repository Details
| SRA | SRR8413894 |
|---|---|
| ENA | SRR8413894 |
| BioProject | PRJNA489275 |
Experiment Details
| Title | RIBOT_ribo_rep2 |
|---|
Sample Details
| Run Accession | SRR8413894 |
|---|---|
| Total Number Of Spots (Original File)) | 47827088 |
| Total Number Of Bases (Original File) | 1628014522 |
| Average Read Length | 34 |
| Original File Size (Mb) | 660 |
| Experiment Id | SRX5223012 |
| Library Strategy | OTHER |
| Library Selection | other |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | NextSeq 500 |
| Sra Project Accession (Srp) | SRP159555 |
| Pubmed Id | 30804338 |
| Sample | SRS4227036 |
| Biosample | SAMN10711896 |
| Sample Type | simple |
| Organism Taxid | 562 |
| Organism | Escherichia coli |
| Sample Name | GSM3553910 |
| Center Name | GEO |
| Submission | SRA765837 |
| Month | 2 |
| Year | 2019 |
| Author | Aleksashin |
| Sample Source | Wild-type strain with pRibo-T plasmid cured of plasmid carrying WT rRNA |
| Sample Title | RIBOT_ribo_rep2 |
| Library-Type | Ribo-Seq |
| Replicate-Number | 2.0 |
| Condition | Wild Type |
| Genotype | SQ171 (+pRibo-T) |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR8413894 | Escherichia coli | Wild-type strain with pRibo-T plasmid cured of plasmid carrying WT rRNA | Ribo-Seq |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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