SRR8434775 (PRJNA514710)
Processing Status: Completed
General Details
| Sample Name | GSM3560215 |
|---|---|
| Organism | Solanum lycopersicum |
| Release Date | 7/2019 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 140620485 |
|---|---|
| Total Bases | 7171644735 |
| Total Bases | 7171644735 |
Repository Details
| SRA | SRR8434775 |
|---|---|
| ENA | SRR8434775 |
| BioProject | PRJNA514710 |
Experiment Details
| Title | Root Ribo-seq sample 2 |
|---|
Sample Details
| Run Accession | SRR8434775 |
|---|---|
| Total Number Of Spots (Original File)) | 140620485 |
| Total Number Of Bases (Original File) | 7171644735 |
| Average Read Length | 51 |
| Original File Size (Mb) | 2791 |
| Experiment Id | SRX5242444 |
| Library Strategy | OTHER |
| Library Selection | other |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina HiSeq 4000 |
| Sra Project Accession (Srp) | SRP178496 |
| Pubmed Id | 31248964 |
| Sample | SRS4245168 |
| Biosample | SAMN10727869 |
| Sample Type | simple |
| Organism Taxid | 4081 |
| Organism | Solanum lycopersicum |
| Sample Name | GSM3560215 |
| Center Name | GEO |
| Submission | SRA833458 |
| Month | 7 |
| Year | 2019 |
| Author | Wu |
| Sample Source | 4-day old roots |
| Sample Title | Root Ribo-seq sample 2 |
| Library-Type | Ribo-Seq |
| Replicate-Number | 2.0 |
| Tissue | Root |
| Strain | Heinz 1706-BG |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR8434775 | Solanum lycopersicum | 4-day old roots | Ribo-Seq |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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