SRR8494678 (PRJNA517401)
Processing Status: Failed
General Details
| Sample Name | GSM3580986 |
|---|---|
| Organism | Mus musculus |
| Release Date | 7/2019 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 18450628 |
|---|---|
| Total Bases | 411793329 |
| Total Bases | 411793329 |
Repository Details
| SRA | SRR8494678 |
|---|---|
| ENA | SRR8494678 |
| BioProject | PRJNA517401 |
Experiment Details
| Title | WT_ribo_seq_1hRecovery-2 |
|---|
Sample Details
| Run Accession | SRR8494678 |
|---|---|
| Total Number Of Spots (Original File)) | 18450628 |
| Total Number Of Bases (Original File) | 411793329 |
| Average Read Length | 22 |
| Original File Size (Mb) | 189 |
| Experiment Id | SRX5299244 |
| Library Strategy | OTHER |
| Library Selection | other |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina HiSeq 2500 |
| Sra Project Accession (Srp) | SRP182641 |
| Pubmed Id | 31292544 |
| Sample | SRS4298247 |
| Biosample | SAMN10829883 |
| Sample Type | simple |
| Organism Taxid | 10090 |
| Organism | Mus musculus |
| Sample Name | GSM3580986 |
| Center Name | GEO |
| Submission | SRA840135 |
| Month | 7 |
| Year | 2019 |
| Author | Ries |
| Sample Source | WT_ribo_seq_1hRecovery |
| Sample Title | WT_ribo_seq_1hRecovery-2 |
| Library-Type | Ribo-Seq |
| Condition | Wild Type |
| Inhibitor | Cycloheximide |
| Timepoint | 1h |
| Cell-Line | mouse embryonic stem cells |
| Genotype | wild type |
| Stress | 1hRecovery |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR8494678 | Mus musculus | WT_ribo_seq_1hRecovery | mouse embryonic stem cells | Ribo-Seq | Cycloheximide |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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