SRR8558080 (PRJNA521751)

Processing Status: Completed

General Details

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Sample Name GSM3597562
Organism Homo sapiens
Release Date 10/2019

Sample Links

Run Details

Spots 496037564
Total Bases 37202817300
Total Bases 37202817300

Repository Details

SRA SRR8558080
ENA SRR8558080
BioProject PRJNA521751

Experiment Details

Title RIBOSEQ-WT-1

Sample Details

Run Accession SRR8558080
Total Number Of Spots (Original File)) 496037564
Total Number Of Bases (Original File) 37202817300
Average Read Length 75
Original File Size (Mb) 12888
Experiment Id SRX5359740
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model NextSeq 500
Sra Project Accession (Srp) SRP185496
Pubmed Id 31619139
Sample SRS4350374
Biosample SAMN10910522
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name GSM3597562
Center Name GEO
Submission SRA848188
Month 10
Year 2019
Author Aliouat
Sample Source colon cancer cell line
Sample Title RIBOSEQ-WT-1
Library-Type Ribo-Seq
Condition Wild Type
Inhibitor Cycloheximide
Tissue Colon
Cell-Line HCT116
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR8558080 Homo sapiens colon cancer cell line HCT116 Ribo-Seq Cycloheximide
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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