SRR8590766 (PRJNA523167)

Processing Status: Completed

General Details

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Sample Name GSM3611932
Organism Homo sapiens
Release Date 12/2019

Sample Links

Run Details

Spots 36836756
Total Bases 2247042116
Total Bases 2247042116

Repository Details

SRA SRR8590766
ENA SRR8590766
BioProject PRJNA523167

Experiment Details

Title MCF10A Full Serum ribosome protected fragments

Sample Details

Run Accession SRR8590766
Total Number Of Spots (Original File)) 36836756
Total Number Of Bases (Original File) 2247042116
Average Read Length 61
Original File Size (Mb) 934
Experiment Id SRX5391045
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2500
Sra Project Accession (Srp) SRP186252
Pubmed Id 31911279
Sample SRS4378986
Biosample SAMN10965470
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name GSM3611932
Center Name GEO
Submission SRA850276
Month 12
Year 2019
Author Vaklavas
Sample Source adult human female breast, fibrocystic disease
Sample Title MCF10A Full Serum ribosome protected fragments
Library-Type Ribo-Seq
Condition High
Inhibitor Cycloheximide
Tissue Breast
Cell-Line T47D
Cellular-Compartment Endoplasmic reticulum
Stage adult
Cancer metastatic
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR8590766 Homo sapiens adult human female breast, fibrocystic disease T47D Ribo-Seq Cycloheximide
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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