SRR8590780 (PRJNA523167)

Processing Status: Completed

General Details

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Sample Name GSM3611937
Organism Homo sapiens
Release Date 12/2019

Sample Links

Run Details

Spots 9574511
Total Bases 584045171
Total Bases 584045171

Repository Details

SRA SRR8590780
ENA SRR8590780
BioProject PRJNA523167

Experiment Details

Title T47D Charcoal Stripped Serum ribosome protected fragments

Sample Details

Run Accession SRR8590780
Total Number Of Spots (Original File)) 9574511
Total Number Of Bases (Original File) 584045171
Average Read Length 61
Original File Size (Mb) 246
Experiment Id SRX5391050
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2500
Sra Project Accession (Srp) SRP186252
Pubmed Id 31911279
Sample SRS4378991
Biosample SAMN10965465
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name GSM3611937
Center Name GEO
Submission SRA850276
Month 12
Year 2019
Author Vaklavas
Sample Source Human ER(+) breast cancer
Sample Title T47D Charcoal Stripped Serum ribosome protected fragments
Library-Type Ribo-Seq
Condition High
Inhibitor Cycloheximide
Tissue Breast
Cell-Line MDA
Cellular-Compartment Endoplasmic reticulum
Stage adult
Cancer metastatic
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR8590780 Homo sapiens Human ER(+) breast cancer MDA Ribo-Seq Cycloheximide
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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