SRR8649954 (PRJNA525090)
Processing Status: Completed
General Details
| Sample Name | GSM3637564 |
|---|---|
| Organism | Homo sapiens |
| Release Date | 3/2019 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 38303136 |
|---|---|
| Total Bases | 1876853664 |
| Total Bases | 1876853664 |
Repository Details
| SRA | SRR8649954 |
|---|---|
| ENA | SRR8649954 |
| BioProject | PRJNA525090 |
Experiment Details
| Title | Ribo HCV rep 1 |
|---|
Sample Details
| Run Accession | SRR8649954 |
|---|---|
| Total Number Of Spots (Original File)) | 38303136 |
| Total Number Of Bases (Original File) | 1876853664 |
| Average Read Length | 49 |
| Original File Size (Mb) | 617 |
| Experiment Id | SRX5447679 |
| Library Strategy | RNA-Seq |
| Library Selection | cDNA |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina HiSeq 4000 |
| Sra Project Accession (Srp) | SRP187206 |
| Pubmed Id | 30875926 |
| Sample | SRS4424573 |
| Biosample | SAMN11041736 |
| Sample Type | simple |
| Organism Taxid | 9606 |
| Organism | Homo sapiens |
| Sample Name | GSM3637564 |
| Center Name | GEO |
| Submission | SRA854376 |
| Month | 3 |
| Year | 2019 |
| Author | Gerresheim |
| Sample Source | heptoma cells |
| Sample Title | Ribo HCV rep 1 |
| Library-Type | Ribo-Seq |
| Replicate-Number | 1.0 |
| Inhibitor | Cycloheximide |
| Timepoint | 6 days post HCV transfectionNA |
| Cell-Line | Huh-7.5 |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR8649954 | Homo sapiens | heptoma cells | Huh-7.5 | Ribo-Seq | Cycloheximide |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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