SRR870729 (PRJNA206070)
Processing Status: Completed
General Details
Sample Name | GSM1152437 |
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Organism | Danio rerio |
Release Date | 9/2013 |
Sample Links
GWIPS-viz | Trips-Viz | Custom Track |
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Visit Trips-Viz | Visit GWIPS-viz |
Run Details
Spots | 4000000 |
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Total Bases | 304000000 |
Total Bases | 304000000 |
Repository Details
SRA | SRR870729 |
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ENA | SRR870729 |
BioProject | PRJNA206070 |
Experiment Details
Title | WT ribosome protected fragments for Ribosome Profiling |
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Sample Details
Run Accession | SRR870729 |
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Total Number Of Spots (Original File)) | 4000000 |
Total Number Of Bases (Original File) | 304000000 |
Average Read Length | 76 |
Original File Size (Mb) | 187 |
Experiment Id | SRX288475 |
Library Strategy | OTHER |
Library Selection | other |
Library Source | TRANSCRIPTOMIC |
Library Layout | SINGLE |
Insert Size | 0 |
Insert Deviation | 0 |
Platform | ILLUMINA |
Model | Illumina HiSeq 2000 |
Sra Project Accession (Srp) | SRP023492 |
Pubmed Id | 24056933 |
Sample | SRS431102 |
Biosample | SAMN02183599 |
Sample Type | simple |
Organism Taxid | 7955 |
Organism | Danio rerio |
Sample Name | GSM1152437 |
Center Name | GEO |
Submission | SRA082637 |
Month | 9 |
Year | 2013 |
Author | Lee |
Sample Source | WT ribosome protected fragments for Ribosome Profiling |
Sample Title | WT ribosome protected fragments for Ribosome Profiling |
Library-Type | RNA-Seq |
Condition | Wild Type |
Inhibitor | alpha-amanitin |
Timepoint | 4h |
Tissue | Embryo |
Stage | 4hpf |
Strain | TUAB |
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