SRR870975 (PRJNA206070)
Processing Status: Not Yet Started
General Details
| Sample Name | GSM1152462 |
|---|---|
| Organism | Danio rerio |
| Release Date | 9/2013 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
| Visit GWIPS-viz |
Run Details
| Spots | 1260079 |
|---|---|
| Total Bases | 95766004 |
| Total Bases | 95766004 |
Repository Details
| SRA | SRR870975 |
|---|---|
| ENA | SRR870975 |
| BioProject | PRJNA206070 |
Experiment Details
| Title | MZpou5f1 Nanog + SoxB1 MO 6hpf Total mRNA |
|---|
Sample Details
| Run Accession | SRR870975 |
|---|---|
| Total Number Of Spots (Original File)) | 1260079 |
| Total Number Of Bases (Original File) | 95766004 |
| Average Read Length | 76 |
| Original File Size (Mb) | 59 |
| Experiment Id | SRX288500 |
| Library Strategy | RNA-Seq |
| Library Selection | cDNA |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina HiSeq 2000 |
| Sra Project Accession (Srp) | SRP023492 |
| Pubmed Id | 24056933 |
| Sample | SRS431127 |
| Biosample | SAMN02183624 |
| Sample Type | simple |
| Organism Taxid | 7955 |
| Organism | Danio rerio |
| Sample Name | GSM1152462 |
| Center Name | GEO |
| Submission | SRA082637 |
| Month | 9 |
| Year | 2013 |
| Author | Lee |
| Sample Source | MZpou5f1 Nanog + SoxB1 MO 6hpf Total mRNA |
| Sample Title | MZpou5f1 Nanog + SoxB1 MO 6hpf Total mRNA |
| Library-Type | RNA-Seq |
| Condition | Wild Type |
| Inhibitor | untreated |
| Timepoint | 6h |
| Tissue | Embryo |
| Stage | 2hpf |
| Strain | TUAB |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR870975 | Danio rerio | MZpou5f1 Nanog + SoxB1 MO 6hpf Total mRNA | RNA-Seq | untreated |  |
 |
 |
 |
|
|
|||
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
ⓘ For more Information on the columns shown here see: About