SRR8763421 (PRJNA528488)

Processing Status: Not Yet Started

General Details

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Sample Name GSM3682249
Organism Solanum lycopersicum
Release Date 9/2019

Sample Links

Run Details

Spots 1377780
Total Bases 70266780
Total Bases 70266780

Repository Details

SRA SRR8763421
ENA SRR8763421
BioProject PRJNA528488

Experiment Details

Title TRASUBHAIRYROOTT4C [C20_TOTAL]

Sample Details

Run Accession SRR8763421
Total Number Of Spots (Original File)) 1377780
Total Number Of Bases (Original File) 70266780
Average Read Length 51
Original File Size (Mb) 30
Experiment Id SRX5554218
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 3000
Sra Project Accession (Srp) SRP189094
Pubmed Id 31604238
Sample SRS4518113
Biosample SAMN11191868
Sample Type simple
Organism Taxid 4081
Organism Solanum lycopersicum
Sample Name GSM3682249
Center Name GEO
Submission SRA863775
Month 9
Year 2019
Author Reynoso
Sample Source hairy root culture 1cm root tips
Sample Title TRASUBHAIRYROOTT4C [C20_TOTAL]
Library-Type Ribo-Seq
Tissue Root
Strain Oryza sativa japonica cv Nipponbare
Genotype 35S:His6:FLAG:OsRPL18-2
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR8763421 Solanum lycopersicum hairy root culture 1cm root tips Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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