SRR8763790 (PRJNA528488)

Processing Status: Not Yet Started

General Details

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Sample Name GSM3682406
Organism Oryza sativa
Release Date 9/2019

Sample Links

Run Details

Spots 50240110
Total Bases 2512005500
Total Bases 2512005500

Repository Details

SRA SRR8763790
ENA SRR8763790
BioProject PRJNA528488

Experiment Details

Title OS_ATAC_CON1 [OS-ATACCON1]

Sample Details

Run Accession SRR8763790
Total Number Of Spots (Original File)) 50240110
Total Number Of Bases (Original File) 2512005500
Average Read Length 50
Original File Size (Mb) 817
Experiment Id SRX5554375
Library Strategy ATAC-seq
Library Selection other
Library Source GENOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 3000
Sra Project Accession (Srp) SRP189094
Pubmed Id 31604238
Sample SRS4518270
Biosample SAMN11191747
Sample Type simple
Organism Taxid 39947
Organism Oryza sativa
Sample Name GSM3682406
Center Name GEO
Submission SRA863775
Month 9
Year 2019
Author Reynoso
Sample Source 7 days-old seedling 1 cm roots tips
Sample Title OS_ATAC_CON1 [OS-ATACCON1]
Library-Type Ribo-Seq
Tissue Root
Strain Solanum lycopersicum cv. M82
Genotype 35S:His6:FLAG-GFP-AtRPL18-HR4
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR8763790 Oryza sativa 7 days-old seedling 1 cm roots tips Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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