SRR8763884 (PRJNA528488)

General Details

View quality reports

Sample Name GSM3682230
Organism Solanum lycopersicum
Release Date 9/2019

Sample Links

Run Details

Spots 1497182
Total Bases 76356282
Total Bases 76356282

Repository Details

SRA SRR8763884
ENA SRR8763884
BioProject PRJNA528488

Experiment Details

Title TOTSUBHAIRYROOTT2B [B20_TOTAL]

Sample Details

Run Accession SRR8763884
Total Number Of Spots (Original File)) 1497182
Total Number Of Bases (Original File) 76356282
Average Read Length 51
Original File Size (Mb) 32
Experiment Id SRX5554199
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 3000
Sra Project Accession (Srp) SRP189094
Pubmed Id 31604238
Sample SRS4518094
Biosample SAMN11191885
Sample Type simple
Organism Taxid 4081
Organism Solanum lycopersicum
Sample Name GSM3682230
Center Name GEO
Submission SRA863775
Month 9
Year 2019
Author Reynoso
Sample Source hairy root culture 1cm root tips
Sample Title TOTSUBHAIRYROOTT2B [B20_TOTAL]
Library-Type Ribo-Seq
Tissue Root
Strain Solanum pennellii LA0716
Genotype 35S:His6:FLAG-GFP-AtRPL18-1
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR8763884 Solanum lycopersicum hairy root culture 1cm root tips Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

ⓘ For more Information on the columns shown here see: About