SRR8763886 (PRJNA528488)

Processing Status: Not Yet Started

General Details

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Sample Name GSM3682230
Organism Solanum lycopersicum
Release Date 9/2019

Sample Links

Run Details

Spots 1560769
Total Bases 79599219
Total Bases 79599219

Repository Details

SRA SRR8763886
ENA SRR8763886
BioProject PRJNA528488

Experiment Details

Title TOTSUBHAIRYROOTT2B [B20_TOTAL]

Sample Details

Run Accession SRR8763886
Total Number Of Spots (Original File)) 1560769
Total Number Of Bases (Original File) 79599219
Average Read Length 51
Original File Size (Mb) 34
Experiment Id SRX5554199
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 3000
Sra Project Accession (Srp) SRP189094
Pubmed Id 31604238
Sample SRS4518094
Biosample SAMN11191885
Sample Type simple
Organism Taxid 4081
Organism Solanum lycopersicum
Sample Name GSM3682230
Center Name GEO
Submission SRA863775
Month 9
Year 2019
Author Reynoso
Sample Source hairy root culture 1cm root tips
Sample Title TOTSUBHAIRYROOTT2B [B20_TOTAL]
Library-Type Ribo-Seq
Tissue Root
Strain Solanum lycopersicum cv. M82
Genotype 35S:His6:FLAG-GFP-AtRPL18-HR2
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR8763886 Solanum lycopersicum hairy root culture 1cm root tips Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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