SRR8839733 (PRJNA530618)

Processing Status: Completed

General Details

View quality reports

Sample Name WT sib (bsf1)
Organism Arabidopsis thaliana
Release Date 4/2019

Sample Links

Run Details

Spots 33076019
Total Bases 3340677919
Total Bases 3340677919

Repository Details

SRA SRR8839733
ENA SRR8839733
BioProject PRJNA530618

Experiment Details

Title 0.0

Sample Details

Run Accession SRR8839733
Total Number Of Spots (Original File)) 33076019
Total Number Of Bases (Original File) 3340677919
Average Read Length 101
Original File Size (Mb) 1044
Experiment Id SRX5627658
Library Name Ribo-seq WT sib (bsf1)
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 4000
Sra Project Accession (Srp) SRP190238
Pubmed Id <NA>
Sample SRS4572840
Biosample SAMN11321003
Sample Type simple
Organism Taxid 3702
Organism Arabidopsis thaliana
Sample Name WT sib (bsf1)
Center Name University of Oregon
Submission SRA868874
Month 4
Year 2019
Author 0.0
Sample Source 0.0
Sample Title 0.0
Library-Type Ribo-Seq
Replicate-Number 0.0
Condition Wild Type
Inhibitor 0.0
Timepoint NANA
Tissue aerial portion of plant
Cell-Line 0.0
Cellular-Compartment 0.0
Stage 0.0
Gene 0.0
Sex 0.0
Strain 0.0
Age 20 days
Infected 0.0
Disease 0.0
Genotype WT
Feeding 0.0
Temperature 0.0
Sirna 0.0
Sgrna 0.0
Shrna 0.0
Plasmid 0.0
Growth-Condition 0.0
Stress 0.0
Cancer 0.0
Microrna 0.0
Individual 0.0
Antibody Used 0.0
Ethnicity 0.0
Dose 0.0
Stimulation 0.0
Host Organism 0.0
Unique Molecular Identifier (Umi) 0.0
Adapter Sequence 0.0
Mode Of Separation 0.0
Mode Of Rrna Depletion 0.0
Barcode Information 0.0
Nucelase Used 0.0
Kit Used 0.0
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR8839733 Arabidopsis thaliana 0.0 0.0 Ribo-Seq 0.0
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

ⓘ For more Information on the columns shown here see: About