SRR9332883 (PRJNA549955)
Processing Status: Completed
General Details
| Sample Name | GSM3900213 |
|---|---|
| Organism | Homo sapiens |
| Release Date | 6/2019 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 37797813 |
|---|---|
| Total Bases | 1889890650 |
| Total Bases | 1889890650 |
Repository Details
| SRA | SRR9332883 |
|---|---|
| ENA | SRR9332883 |
| BioProject | PRJNA549955 |
Experiment Details
| Title | Ribo_siP_3 |
|---|
Sample Details
| Run Accession | SRR9332883 |
|---|---|
| Total Number Of Spots (Original File)) | 37797813 |
| Total Number Of Bases (Original File) | 1889890650 |
| Average Read Length | 50 |
| Original File Size (Mb) | 974 |
| Experiment Id | SRX6099392 |
| Library Strategy | OTHER |
| Library Selection | other |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina HiSeq 2000 |
| Sra Project Accession (Srp) | SRP202033 |
| Pubmed Id | <NA> |
| Sample | SRS4999920 |
| Biosample | SAMN12100522 |
| Sample Type | simple |
| Organism Taxid | 9606 |
| Organism | Homo sapiens |
| Sample Name | GSM3900213 |
| Center Name | GEO |
| Submission | SRA901599 |
| Month | 6 |
| Year | 2019 |
| Sample Source | RPLP1 and RPLP2 depleted A549 cells infected with DENV. |
| Sample Title | Ribo_siP_3 |
| Library-Type | Ribo-Seq |
| Condition | Test |
| Tissue | Lung |
| Cell-Line | A549 |
| Infected | Dengue 2, strain New Guinea C |
| Sirna | siP2_4 |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR9332883 | Homo sapiens | RPLP1 and RPLP2 depleted A549 cells infected with DENV. | A549 | Ribo-Seq |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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