SRR9641406 (PRJNA552552)

Processing Status: Completed

General Details

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Sample Name GSM3927397
Organism Mus musculus
Release Date 3/2020

Sample Links

Run Details

Spots 20038055
Total Bases 841598310
Total Bases 841598310

Repository Details

SRA SRR9641406
ENA SRR9641406
BioProject PRJNA552552

Experiment Details

Title RFP_SL_d3_Rep2

Sample Details

Run Accession SRR9641406
Total Number Of Spots (Original File)) 20038055
Total Number Of Bases (Original File) 841598310
Average Read Length 42
Original File Size (Mb) 631
Experiment Id SRX6403250
Library Name 0.0
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2000
Sra Project Accession (Srp) SRP212919
Pubmed Id 32238817
Sample SRS5061311
Biosample SAMN12211604
Sample Type simple
Organism Taxid 10090
Organism Mus musculus
Sample Name GSM3927397
Center Name GEO
Submission SRA916697
Month 3
Year 2020
Author Atlasi
Sample Source E14Tg2a
Sample Title RFP_SL_d3_Rep2
Library-Type Ribo-Seq
Replicate-Number 2.0
Condition Test
Inhibitor 0.0
Timepoint NANA
Tissue Embryo
Cell-Line E14
Cellular-Compartment 0.0
Stage 0.0
Gene 0.0
Sex 0.0
Strain E14
Age 0.0
Infected 0.0
Disease 0.0
Genotype 0.0
Feeding 0.0
Temperature 0.0
Sirna 0.0
Sgrna 0.0
Shrna 0.0
Plasmid 0.0
Growth-Condition 0.0
Stress 0.0
Cancer 0.0
Microrna 0.0
Individual 0.0
Antibody Used 0.0
Ethnicity 0.0
Dose 0.0
Stimulation 0.0
Host Organism 0.0
Unique Molecular Identifier (Umi) 0.0
Adapter Sequence 0.0
Mode Of Separation 0.0
Mode Of Rrna Depletion 0.0
Barcode Information 0.0
Nucelase Used 0.0
Kit Used 0.0
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR9641406 Mus musculus E14Tg2a E14 Ribo-Seq 0.0
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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