SRR9691528 (PRJNA554781)

Processing Status: Completed

General Details

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Sample Name GSM3942219
Organism Escherichia coli
Release Date 7/2022

Sample Links

Run Details

Spots 2122341
Total Bases 161297916
Total Bases 161297916

Repository Details

SRA SRR9691528
ENA SRR9691528
BioProject PRJNA554781

Experiment Details

Title ckDDC-2 [ribosome profiling]

Sample Details

Run Accession SRR9691528
Total Number Of Spots (Original File)) 2122341
Total Number Of Bases (Original File) 161297916
Average Read Length 76
Original File Size (Mb) 54
Experiment Id SRX6450804
Library Name 0.0
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model NextSeq 500
Sra Project Accession (Srp) SRP214776
Pubmed Id <NA>
Sample SRS5104522
Biosample SAMN12283966
Sample Type simple
Organism Taxid 562
Organism Escherichia coli
Sample Name GSM3942219
Center Name GEO
Submission SRA921338
Month 7
Year 2022
Author 0.0
Sample Source ckDDC
Sample Title ckDDC-2 [ribosome profiling]
Library-Type Ribo-Seq
Replicate-Number 0.0
Condition Test
Inhibitor 0.0
Timepoint 2h
Tissue 0.0
Cell-Line 0.0
Cellular-Compartment 0.0
Stage 0.0
Gene rnPNMT
Sex 0.0
Strain Gly2
Age 0.0
Infected 0.0
Disease 0.0
Genotype 0.0
Feeding 0.0
Temperature 0.0
Sirna 0.0
Sgrna 0.0
Shrna 0.0
Plasmid 0.0
Growth-Condition 1mM Rhamnose
Stress 0.0
Cancer 0.0
Microrna 0.0
Individual 0.0
Antibody Used 0.0
Ethnicity 0.0
Dose 0.0
Stimulation 0.0
Host Organism 0.0
Unique Molecular Identifier (Umi) 0.0
Adapter Sequence 0.0
Mode Of Separation 0.0
Mode Of Rrna Depletion 0.0
Barcode Information 0.0
Nucelase Used 0.0
Kit Used 0.0
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR9691528 Escherichia coli ckDDC 0.0 Ribo-Seq 0.0
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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