SRR9691635 (PRJNA554781)

Processing Status: Completed

General Details

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Sample Name GSM3942246
Organism Escherichia coli
Release Date 7/2022

Sample Links

Run Details

Spots 3219866
Total Bases 244709816
Total Bases 244709816

Repository Details

SRA SRR9691635
ENA SRR9691635
BioProject PRJNA554781

Experiment Details

Title hsTPH1-2 [ribosome profiling]

Sample Details

Run Accession SRR9691635
Total Number Of Spots (Original File)) 3219866
Total Number Of Bases (Original File) 244709816
Average Read Length 76
Original File Size (Mb) 87
Experiment Id SRX6450831
Library Name 0.0
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model NextSeq 500
Sra Project Accession (Srp) SRP214776
Pubmed Id <NA>
Sample SRS5104548
Biosample SAMN12283984
Sample Type simple
Organism Taxid 562
Organism Escherichia coli
Sample Name GSM3942246
Center Name GEO
Submission SRA921338
Month 7
Year 2022
Author 0.0
Sample Source hsTPH1
Sample Title hsTPH1-2 [ribosome profiling]
Library-Type Ribo-Seq
Replicate-Number 0.0
Condition Test
Inhibitor 0.0
Timepoint 2h
Tissue Embryo
Cell-Line 0.0
Cellular-Compartment 0.0
Stage 0.0
Gene TP53B1
Sex 0.0
Strain Gly2
Age 0.0
Infected 0.0
Disease 0.0
Genotype 0.0
Feeding 0.0
Temperature 0.0
Sirna 0.0
Sgrna 0.0
Shrna 0.0
Plasmid 0.0
Growth-Condition 1mM Rhamnose
Stress 0.0
Cancer 0.0
Microrna 0.0
Individual 0.0
Antibody Used 0.0
Ethnicity 0.0
Dose 0.0
Stimulation 0.0
Host Organism 0.0
Unique Molecular Identifier (Umi) 0.0
Adapter Sequence 0.0
Mode Of Separation 0.0
Mode Of Rrna Depletion 0.0
Barcode Information 0.0
Nucelase Used 0.0
Kit Used 0.0
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR9691635 Escherichia coli hsTPH1 0.0 Ribo-Seq 0.0
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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