DRR255646 (PRJDB10799)

Processing Status: Completed

General Details

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Sample Name SAMD00258767
Organism Arabidopsis thaliana
Release Date 12/2020

Sample Links

Run Details

Spots 47051979
Total Bases 1624244245
Total Bases 1624244245

Repository Details

SRA DRR255646
ENA DRR255646
BioProject PRJDB10799

Experiment Details

Title Ribo-seq_pgr3-3_rep1

Sample Details

Run Accession DRR255646
Total Number Of Spots (Original File)) 47051979
Total Number Of Bases (Original File) 1624244245
Average Read Length 34
Original File Size (Mb) 703
Experiment Id DRX245364
Library Name 0.0
Library Strategy RNA-Seq
Library Selection size fractionation
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 4000
Sra Project Accession (Srp) DRP006829
Pubmed Id <NA>
Sample DRS166432
Biosample SAMD00258767
Sample Type simple
Organism Taxid 3702
Organism Arabidopsis thaliana
Sample Name SAMD00258767
Center Name KYOTO_SC
Submission DRA011106
Month 12
Year 2020
Author 0.0
Sample Source 0.0
Sample Title Ribo-seq_pgr3-3_rep1
Library-Type Ribo-Seq
Replicate-Number 1.0
Condition Test
Inhibitor 0.0
Timepoint NANA
Tissue 0.0
Cell-Line 0.0
Cellular-Compartment 0.0
Stage 0.0
Gene 0.0
Sex 0.0
Strain 0.0
Age 0.0
Infected 0.0
Disease 0.0
Genotype pgr3-3
Feeding 0.0
Temperature 0.0
Sirna 0.0
Sgrna 0.0
Shrna 0.0
Plasmid 0.0
Growth-Condition 0.0
Stress 0.0
Cancer 0.0
Microrna 0.0
Individual 0.0
Antibody Used 0.0
Ethnicity 0.0
Dose 0.0
Stimulation 0.0
Host Organism 0.0
Unique Molecular Identifier (Umi) 0.0
Adapter Sequence 0.0
Mode Of Separation 0.0
Mode Of Rrna Depletion 0.0
Barcode Information 0.0
Nucelase Used 0.0
Kit Used 0.0
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
DRR255646 Arabidopsis thaliana 0.0 0.0 Ribo-Seq 0.0
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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