DRR395080 (PRJDB13770)
Processing Status: Failed
General Details
| Sample Name | SAMD00505502 |
|---|---|
| Organism | Arabidopsis thaliana |
| Release Date | 8/2022 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 16432081 |
|---|---|
| Total Bases | 347328942 |
| Total Bases | 347328942 |
Repository Details
| SRA | DRR395080 |
|---|---|
| ENA | DRR395080 |
| BioProject | PRJDB13770 |
Experiment Details
| Title | Ribo-seq of Arabiodpsis thaliana seedling: DMSO (control), blue-light irradation rep1 |
|---|
Sample Details
| Run Accession | DRR395080 |
|---|---|
| Total Number Of Spots (Original File)) | 16432081 |
| Total Number Of Bases (Original File) | 347328942 |
| Average Read Length | 21 |
| Original File Size (Mb) | 169 |
| Experiment Id | DRX380859 |
| Library Name | Ribo-seq of Arabiodpsis thaliana seedling: DMSO (control), blue-light irradation, rep1 |
| Library Strategy | OTHER |
| Library Selection | other |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | HiSeq X Ten |
| Sra Project Accession (Srp) | DRP008835 |
| Pubmed Id | <NA> |
| Sample | DRS248916 |
| Biosample | SAMD00505502 |
| Sample Type | simple |
| Organism Taxid | 3702 |
| Organism | Arabidopsis thaliana |
| Sample Name | SAMD00505502 |
| Center Name | RIKEN Center for Sustainable Resource Science |
| Submission | DRA014541 |
| Month | 8 |
| Year | 2022 |
| Sample Title | Ribo-seq of Arabiodpsis thaliana seedling: DMSO (control), blue-light irradation rep1 |
| Library-Type | Ribo-Seq |
| Replicate-Number | 1.0 |
| Condition | Wild Type |
| Tissue | Seedling |
| Cellular-Compartment | DMSO |
| Age | 3-day-old |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| DRR395080 | Arabidopsis thaliana | Ribo-Seq |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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