DRR395080 (PRJDB13770)

General Details

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Sample Name SAMD00505502
Organism Arabidopsis thaliana
Release Date 8/2022

Sample Links

Run Details

Spots 16432081
Total Bases 347328942
Total Bases 347328942

Repository Details

SRA DRR395080
ENA DRR395080
BioProject PRJDB13770

Experiment Details

Title Ribo-seq of Arabiodpsis thaliana seedling: DMSO (control), blue-light irradation rep1

Sample Details

Run Accession DRR395080
Total Number Of Spots (Original File)) 16432081
Total Number Of Bases (Original File) 347328942
Average Read Length 21
Original File Size (Mb) 169
Experiment Id DRX380859
Library Name Ribo-seq of Arabiodpsis thaliana seedling: DMSO (control), blue-light irradation, rep1
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model HiSeq X Ten
Sra Project Accession (Srp) DRP008835
Pubmed Id <NA>
Sample DRS248916
Biosample SAMD00505502
Sample Type simple
Organism Taxid 3702
Organism Arabidopsis thaliana
Sample Name SAMD00505502
Center Name RIKEN Center for Sustainable Resource Science
Submission DRA014541
Month 8
Year 2022
Sample Title Ribo-seq of Arabiodpsis thaliana seedling: DMSO (control), blue-light irradation rep1
Library-Type Ribo-Seq
Replicate-Number 1.0
Condition Wild Type
Tissue Seedling
Cellular-Compartment DMSO
Age 3-day-old
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz RiboCrypt Reads BAM BigWig (F) BigWig (R)
DRR395080 Arabidopsis thaliana Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz RiboCrypt Reads BAM BigWig (F) BigWig (R)

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