SRR10149789 (PRJNA566449)

Processing Status: Completed

General Details

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Sample Name GSM4086601
Organism Mus musculus
Release Date 12/2019

Sample Links

Run Details

Spots 23292708
Total Bases 1164635400
Total Bases 1164635400

Repository Details

SRA SRR10149789
ENA SRR10149789
BioProject PRJNA566449

Experiment Details

Title VACV infected RPF replicate 1

Sample Details

Run Accession SRR10149789
Total Number Of Spots (Original File)) 23292708
Total Number Of Bases (Original File) 1164635400
Average Read Length 50
Original File Size (Mb) 704
Experiment Id SRX6875243
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2000
Sra Project Accession (Srp) SRP222582
Pubmed Id 31851930
Sample SRS5411148
Biosample SAMN12790531
Sample Type simple
Organism Taxid 10090
Organism Mus musculus
Sample Name GSM4086601
Center Name GEO
Submission SRA965107
Month 12
Year 2019
Author Hoang
Sample Source breast cancer cell model
Sample Title VACV infected RPF replicate 1
Library-Type Ribo-Seq
Replicate-Number 1.0
Condition Test
Timepoint 18 hours post-infection
Tissue Breast
Cell-Line 4T1
Strain BALB/cfC3H
Infected VACV infected
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR10149789 Mus musculus breast cancer cell model 4T1 Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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