SRR10149793 (PRJNA566449)

General Details

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Sample Name GSM4086605
Organism Mus musculus
Release Date 12/2019

Sample Links

Run Details

Spots 28395947
Total Bases 1419797350
Total Bases 1419797350

Repository Details

SRA SRR10149793
ENA SRR10149793
BioProject PRJNA566449

Experiment Details

Title mock infected RPF replicate 2

Sample Details

Run Accession SRR10149793
Total Number Of Spots (Original File)) 28395947
Total Number Of Bases (Original File) 1419797350
Average Read Length 50
Original File Size (Mb) 854
Experiment Id SRX6875247
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2000
Sra Project Accession (Srp) SRP222582
Pubmed Id 31851930
Sample SRS5411152
Biosample SAMN12790527
Sample Type simple
Organism Taxid 10090
Organism Mus musculus
Sample Name GSM4086605
Center Name GEO
Submission SRA965107
Month 12
Year 2019
Author Hoang
Sample Source breast cancer cell model
Sample Title mock infected RPF replicate 2
Library-Type Ribo-Seq
Replicate-Number 2.0
Condition Control
Timepoint 18 hours post-infection
Tissue Breast
Cell-Line 4T1
Strain BALB/cfC3H
Infected mock infected
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR10149793 Mus musculus breast cancer cell model 4T1 Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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