SRR10149799 (PRJNA566449)

Processing Status: Completed

General Details

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Sample Name GSM4086611
Organism Mus musculus
Release Date 12/2019

Sample Links

Run Details

Spots 32336624
Total Bases 1616831200
Total Bases 1616831200

Repository Details

SRA SRR10149799
ENA SRR10149799
BioProject PRJNA566449

Experiment Details

Title HSV1 infected RPF replicate 2

Sample Details

Run Accession SRR10149799
Total Number Of Spots (Original File)) 32336624
Total Number Of Bases (Original File) 1616831200
Average Read Length 50
Original File Size (Mb) 930
Experiment Id SRX6875253
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2000
Sra Project Accession (Srp) SRP222582
Pubmed Id 31851930
Sample SRS5411158
Biosample SAMN12790521
Sample Type simple
Organism Taxid 10090
Organism Mus musculus
Sample Name GSM4086611
Center Name GEO
Submission SRA965107
Month 12
Year 2019
Author Hoang
Sample Source breast cancer cell model
Sample Title HSV1 infected RPF replicate 2
Library-Type Ribo-Seq
Replicate-Number 2.0
Condition Test
Timepoint 18 hours post-infection
Tissue Breast
Cell-Line 4T1
Strain BALB/cfC3H
Infected HSV1 infected
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR10149799 Mus musculus breast cancer cell model 4T1 Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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