SRR1041222 (PRJNA230377)

Processing Status: Not Yet Started

General Details

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Sample Name GSM1277173
Organism Caenorhabditis elegans
Release Date 3/2014

Sample Links

Run Details

Spots 6772541
Total Bases 345399591
Total Bases 345399591

Repository Details

SRA SRR1041222
ENA SRR1041222
BioProject PRJNA230377

Experiment Details

Title RNASeq_riboM_contDevA_N2_21hr

Sample Details

Run Accession SRR1041222
Total Number Of Spots (Original File)) 6772541
Total Number Of Bases (Original File) 345399591
Average Read Length 51
Original File Size (Mb) 210
Experiment Id SRX385606
Library Name 0.0
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2000
Sra Project Accession (Srp) SRP033412
Pubmed Id 24440504
Sample SRS509712
Biosample SAMN02428690
Sample Type simple
Organism Taxid 6239
Organism Caenorhabditis elegans
Sample Name GSM1277173
Center Name GEO
Submission SRA115007
Month 3
Year 2014
Author Hendriks
Sample Source Whole-worm
Sample Title RNASeq_riboM_contDevA_N2_21hr
Library-Type RNA-Seq
Replicate-Number 0.0
Condition Test
Inhibitor 0.0
Timepoint NANA_23 hours
Tissue 0.0
Cell-Line 0.0
Cellular-Compartment 0.0
Stage 0.0
Gene 0.0
Sex 0.0
Strain N2
Age 0.0
Infected 0.0
Disease 0.0
Genotype 0.0
Feeding 0.0
Temperature 0.0
Sirna 0.0
Sgrna 0.0
Shrna 0.0
Plasmid 0.0
Growth-Condition Continuous 1
Stress 0.0
Cancer 0.0
Microrna 0.0
Individual 0.0
Antibody Used 0.0
Ethnicity 0.0
Dose 0.0
Stimulation 0.0
Host Organism 0.0
Unique Molecular Identifier (Umi) 0.0
Adapter Sequence 0.0
Mode Of Separation 0.0
Mode Of Rrna Depletion 0.0
Barcode Information 0.0
Nucelase Used 0.0
Kit Used 0.0
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR1041222 Caenorhabditis elegans Whole-worm 0.0 RNA-Seq 0.0
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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