SRR1041228 (PRJNA230377)

Processing Status: Not Yet Started

General Details

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Sample Name GSM1277178
Organism Caenorhabditis elegans
Release Date 3/2014

Sample Links

Run Details

Spots 10340736
Total Bases 527377536
Total Bases 527377536

Repository Details

SRA SRR1041228
ENA SRR1041228
BioProject PRJNA230377

Experiment Details

Title RNASeq_riboM_contDevA_N2_26hr

Sample Details

Run Accession SRR1041228
Total Number Of Spots (Original File)) 10340736
Total Number Of Bases (Original File) 527377536
Average Read Length 51
Original File Size (Mb) 330
Experiment Id SRX385611
Library Name 0.0
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2000
Sra Project Accession (Srp) SRP033412
Pubmed Id 24440504
Sample SRS509717
Biosample SAMN02428716
Sample Type simple
Organism Taxid 6239
Organism Caenorhabditis elegans
Sample Name GSM1277178
Center Name GEO
Submission SRA115007
Month 3
Year 2014
Author Hendriks
Sample Source Whole-worm
Sample Title RNASeq_riboM_contDevA_N2_26hr
Library-Type RNA-Seq
Replicate-Number 0.0
Condition Test
Inhibitor 0.0
Timepoint NANA_29 hours
Tissue 0.0
Cell-Line 0.0
Cellular-Compartment 0.0
Stage 0.0
Gene 0.0
Sex 0.0
Strain N2
Age 0.0
Infected 0.0
Disease 0.0
Genotype 0.0
Feeding 0.0
Temperature 0.0
Sirna 0.0
Sgrna 0.0
Shrna 0.0
Plasmid 0.0
Growth-Condition Continuous 1
Stress 0.0
Cancer 0.0
Microrna 0.0
Individual 0.0
Antibody Used 0.0
Ethnicity 0.0
Dose 0.0
Stimulation 0.0
Host Organism 0.0
Unique Molecular Identifier (Umi) 0.0
Adapter Sequence 0.0
Mode Of Separation 0.0
Mode Of Rrna Depletion 0.0
Barcode Information 0.0
Nucelase Used 0.0
Kit Used 0.0
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR1041228 Caenorhabditis elegans Whole-worm 0.0 RNA-Seq 0.0
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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