SRR10416858 (PRJNA588223)

Processing Status: Not Yet Started

General Details

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Sample Name GSM4154184
Organism Homo sapiens
Release Date 7/2020

Sample Links

Run Details

Spots 35567551
Total Bases 1813945101
Total Bases 1813945101

Repository Details

SRA SRR10416858
ENA SRR10416858
BioProject PRJNA588223

Experiment Details

Title 80S Ribosome Footprints from DENR KO Hela Cell Line 2

Sample Details

Run Accession SRR10416858
Total Number Of Spots (Original File)) 35567551
Total Number Of Bases (Original File) 1813945101
Average Read Length 51
Original File Size (Mb) 799
Experiment Id SRX7115051
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model NextSeq 550
Sra Project Accession (Srp) SRP229088
Pubmed Id 32938922
Sample SRS5625824
Biosample SAMN13230909
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name GSM4154184
Center Name GEO
Submission SRA992710
Month 7
Year 2020
Author Bohlen
Sample Source Hela Cells
Sample Title 80S Ribosome Footprints from DENR KO Hela Cell Line 2
Replicate-Number 2.0
Condition KO
Sex female
Genotype DENR KO
Mode Of Rrna Depletion Ribo Zero Gold Illumina
Barcode Information TACAAG
Kit Used Nextflex small RNA
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR10416858 Homo sapiens Hela Cells
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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