SRR11362454 (PRJNA613736)

Processing Status: Completed

General Details

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Sample Name GSM4425996
Organism Homo sapiens
Release Date 3/2020

Sample Links

Run Details

Spots 2830546
Total Bases 283054600
Total Bases 283054600

Repository Details

SRA SRR11362454
ENA SRR11362454
BioProject PRJNA613736

Experiment Details

Title set1_2C_riboCop

Sample Details

Run Accession SRR11362454
Total Number Of Spots (Original File)) 2830546
Total Number Of Bases (Original File) 283054600
Average Read Length 100
Original File Size (Mb) 122
Experiment Id SRX7963876
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2500
Sra Project Accession (Srp) SRP253534
Pubmed Id 32503920
Sample SRS6349894
Biosample SAMN14419003
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name GSM4425996
Center Name GEO
Submission SRA1057647
Month 3
Year 2020
Author Zinshteyn
Sample Source HEK293T cells
Sample Title set1_2C_riboCop
Library-Type Ribo-Seq
Inhibitor Cycloheximide
Tissue Kidney
Cell-Line HEK293
Adapter Sequence NNNNNNCACTCGGGCACCAAGGACNNNNNNCACTCGGGCACCAAGGAC
Mode Of Rrna Depletion riboCop
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR11362454 Homo sapiens HEK293T cells HEK293 Ribo-Seq Cycloheximide
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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