SRR11362456 (PRJNA613736)

Processing Status: Completed

General Details

View quality reports

Sample Name GSM4425998
Organism Homo sapiens
Release Date 3/2020

Sample Links

Run Details

Spots 3559590
Total Bases 177979500
Total Bases 177979500

Repository Details

SRA SRR11362456
ENA SRR11362456
BioProject PRJNA613736

Experiment Details

Title set2_NEBNext_20_34

Sample Details

Run Accession SRR11362456
Total Number Of Spots (Original File)) 3559590
Total Number Of Bases (Original File) 177979500
Average Read Length 50
Original File Size (Mb) 94
Experiment Id SRX7963878
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2500
Sra Project Accession (Srp) SRP253534
Pubmed Id 32503920
Sample SRS6349896
Biosample SAMN14419001
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name GSM4425998
Center Name GEO
Submission SRA1057647
Month 3
Year 2020
Author Zinshteyn
Sample Source K562 cells
Sample Title set2_NEBNext_20_34
Library-Type Ribo-Seq
Inhibitor Cycloheximide
Tissue Bone
Cell-Line K562
Adapter Sequence NNNNNNCACTCGGGCACCAAGGACNNNNNNCACTCGGGCACCAAGGAC
Mode Of Rrna Depletion NEBNExt
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR11362456 Homo sapiens K562 cells K562 Ribo-Seq Cycloheximide
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

ⓘ For more Information on the columns shown here see: About