SRR11362465 (PRJNA613736)
Processing Status: Completed
General Details
| Sample Name | GSM4426007 |
|---|---|
| Organism | Homo sapiens |
| Release Date | 3/2020 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 77982350 |
|---|---|
| Total Bases | 3899117500 |
| Total Bases | 3899117500 |
Repository Details
| SRA | SRR11362465 |
|---|---|
| ENA | SRR11362465 |
| BioProject | PRJNA613736 |
Experiment Details
| Title | set3_ribopools_no_heat_2 |
|---|
Sample Details
| Run Accession | SRR11362465 |
|---|---|
| Total Number Of Spots (Original File)) | 77982350 |
| Total Number Of Bases (Original File) | 3899117500 |
| Average Read Length | 50 |
| Original File Size (Mb) | 2015 |
| Experiment Id | SRX7963887 |
| Library Strategy | RNA-Seq |
| Library Selection | cDNA |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina HiSeq 2500 |
| Sra Project Accession (Srp) | SRP253534 |
| Pubmed Id | 32503920 |
| Sample | SRS6349905 |
| Biosample | SAMN14418992 |
| Sample Type | simple |
| Organism Taxid | 9606 |
| Organism | Homo sapiens |
| Sample Name | GSM4426007 |
| Center Name | GEO |
| Submission | SRA1057647 |
| Month | 3 |
| Year | 2020 |
| Author | Zinshteyn |
| Sample Source | K562 cells |
| Sample Title | set3_ribopools_no_heat_2 |
| Library-Type | Ribo-Seq |
| Inhibitor | Cycloheximide |
| Tissue | Bone |
| Cell-Line | K562 |
| Adapter Sequence | NNNNNNCACTCGGGCACCAAGGACNNNNNNCACTCGGGCACCAAGGAC |
| Mode Of Rrna Depletion | ribopools, cold elution |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR11362465 | Homo sapiens | K562 cells | K562 | Ribo-Seq | Cycloheximide |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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