SRR11362469 (PRJNA613736)

Processing Status: Completed

General Details

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Sample Name GSM4426011
Organism Homo sapiens
Release Date 3/2020

Sample Links

Run Details

Spots 9746667
Total Bases 487333350
Total Bases 487333350

Repository Details

SRA SRR11362469
ENA SRR11362469
BioProject PRJNA613736

Experiment Details

Title set3_ribozero_p_of

Sample Details

Run Accession SRR11362469
Total Number Of Spots (Original File)) 9746667
Total Number Of Bases (Original File) 487333350
Average Read Length 50
Original File Size (Mb) 258
Experiment Id SRX7963891
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2500
Sra Project Accession (Srp) SRP253534
Pubmed Id 32503920
Sample SRS6349909
Biosample SAMN14419016
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name GSM4426011
Center Name GEO
Submission SRA1057647
Month 3
Year 2020
Author Zinshteyn
Sample Source K562 cells
Sample Title set3_ribozero_p_of
Library-Type Ribo-Seq
Condition Test
Inhibitor Cycloheximide
Tissue Bone
Cell-Line K562
Adapter Sequence NNNNNNCACTCGGGCACCAAGGACNNNNNNCACTCGGGCACCAAGGAC
Mode Of Rrna Depletion ribo-zero plus, oligos, formaldehyde
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR11362469 Homo sapiens K562 cells K562 Ribo-Seq Cycloheximide
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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