SRR11362472 (PRJNA613736)

Processing Status: Completed

General Details

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Sample Name GSM4426014
Organism Homo sapiens
Release Date 3/2020

Sample Links

Run Details

Spots 63699750
Total Bases 3184987500
Total Bases 3184987500

Repository Details

SRA SRR11362472
ENA SRR11362472
BioProject PRJNA613736

Experiment Details

Title set4_oligo_depletion

Sample Details

Run Accession SRR11362472
Total Number Of Spots (Original File)) 63699750
Total Number Of Bases (Original File) 3184987500
Average Read Length 50
Original File Size (Mb) 1648
Experiment Id SRX7963894
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2500
Sra Project Accession (Srp) SRP253534
Pubmed Id 32503920
Sample SRS6349912
Biosample SAMN14419013
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name GSM4426014
Center Name GEO
Submission SRA1057647
Month 3
Year 2020
Author Zinshteyn
Sample Source HEK293FT cells
Sample Title set4_oligo_depletion
Library-Type Ribo-Seq
Inhibitor Cycloheximide
Tissue Kidney
Cell-Line HEK293
Adapter Sequence NNNNNNCACTCGGGCACCAAGGACNNNNNNCACTCGGGCACCAAGGAC
Mode Of Rrna Depletion custom oligos
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR11362472 Homo sapiens HEK293FT cells HEK293 Ribo-Seq Cycloheximide
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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