SRR11542141 (PRJNA625261)

Processing Status: Completed

General Details

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Sample Name GSM4475936
Organism Homo sapiens
Release Date 12/2020

Sample Links

Run Details

Spots 15502621
Total Bases 471029710
Total Bases 471029710

Repository Details

SRA SRR11542141
ENA SRR11542141
BioProject PRJNA625261

Experiment Details

Title 1650_DMSO1

Sample Details

Run Accession SRR11542141
Total Number Of Spots (Original File)) 15502621
Total Number Of Bases (Original File) 471029710
Average Read Length 30
Original File Size (Mb) 190
Experiment Id SRX8112239
Library Name 0.0
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 4000
Sra Project Accession (Srp) SRP256332
Pubmed Id 33296667
Sample SRS6477326
Biosample SAMN14596023
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name GSM4475936
Center Name GEO
Submission SRA1065150
Month 12
Year 2020
Author Chen
Sample Source Rnase I footprinting, ribosome pelleting, RNA extraction
Sample Title 1650_DMSO1
Library-Type Ribo-Seq
Replicate-Number 0.0
Condition Test
Inhibitor Cycloheximide
Timepoint NANA
Tissue 0.0
Cell-Line NCIH1650
Cellular-Compartment DMSO
Stage 0.0
Gene 0.0
Sex 0.0
Strain 0.0
Age 0.0
Infected 0.0
Disease 0.0
Genotype WT
Feeding 0.0
Temperature 0.0
Sirna 0.0
Sgrna 0.0
Shrna 0.0
Plasmid 0.0
Growth-Condition 0.0
Stress 0.0
Cancer 0.0
Microrna 0.0
Individual 0.0
Antibody Used 0.0
Ethnicity 0.0
Dose 0.0
Stimulation 0.0
Host Organism 0.0
Unique Molecular Identifier (Umi) 0.0
Adapter Sequence 0.0
Mode Of Separation 0.0
Mode Of Rrna Depletion 0.0
Barcode Information 0.0
Nucelase Used 0.0
Kit Used 0.0
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR11542141 Homo sapiens Rnase I footprinting, ribosome pelleting, RNA extraction NCIH1650 Ribo-Seq Cycloheximide
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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