SRR11553469 (PRJNA588223)

Processing Status: Not Yet Started

General Details

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Sample Name GSM4478780
Organism Homo sapiens
Release Date 7/2020

Sample Links

Run Details

Spots 178529442
Total Bases 17852944200
Total Bases 17852944200

Repository Details

SRA SRR11553469
ENA SRR11553469
BioProject PRJNA588223

Experiment Details

Title 40S Ribosome Footprints from DENR KO Hela Cell Line 1

Sample Details

Run Accession SRR11553469
Total Number Of Spots (Original File)) 178529442
Total Number Of Bases (Original File) 17852944200
Average Read Length 100
Original File Size (Mb) 7821
Experiment Id SRX8123226
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model NextSeq 550
Sra Project Accession (Srp) SRP229088
Pubmed Id 32938922
Sample SRS6487662
Biosample SAMN14605241
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name GSM4478780
Center Name GEO
Submission SRA992710
Month 7
Year 2020
Author Bohlen
Sample Source Hela Cells
Sample Title 40S Ribosome Footprints from DENR KO Hela Cell Line 1
Library-Type SSU
Replicate-Number 1.0
Condition KO
Sex female
Genotype DENR KO
Mode Of Rrna Depletion -
Barcode Information TCCGGAGA
Kit Used Takara/Clonentech
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR11553469 Homo sapiens Hela Cells SSU
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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