SRR11553470 (PRJNA588223)

Processing Status: Not Yet Started

General Details

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Sample Name GSM4478781
Organism Homo sapiens
Release Date 7/2020

Sample Links

Run Details

Spots 145964720
Total Bases 14596472000
Total Bases 14596472000

Repository Details

SRA SRR11553470
ENA SRR11553470
BioProject PRJNA588223

Experiment Details

Title 40S Ribosome Footprints from DENR KO Hela Cell Line 2

Sample Details

Run Accession SRR11553470
Total Number Of Spots (Original File)) 145964720
Total Number Of Bases (Original File) 14596472000
Average Read Length 100
Original File Size (Mb) 6402
Experiment Id SRX8123227
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model NextSeq 550
Sra Project Accession (Srp) SRP229088
Pubmed Id 32938922
Sample SRS6487663
Biosample SAMN14605240
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name GSM4478781
Center Name GEO
Submission SRA992710
Month 7
Year 2020
Author Bohlen
Sample Source Hela Cells
Sample Title 40S Ribosome Footprints from DENR KO Hela Cell Line 2
Library-Type SSU
Replicate-Number 2.0
Condition KO
Sex female
Genotype DENR KO
Mode Of Rrna Depletion -
Barcode Information CGCTCATT
Kit Used Takara/Clonentech
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR11553470 Homo sapiens Hela Cells SSU
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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