SRR11798519 (PRJNA633140)
Processing Status: Completed
General Details
| Sample Name | GSM4556253 |
|---|---|
| Organism | Mus musculus |
| Release Date | 4/2022 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 25835345 |
|---|---|
| Total Bases | 1317602595 |
| Total Bases | 1317602595 |
Repository Details
| SRA | SRR11798519 |
|---|---|
| ENA | SRR11798519 |
| BioProject | PRJNA633140 |
Experiment Details
| Title | eif4a2_RPF_KD_rep1 |
|---|
Sample Details
| Run Accession | SRR11798519 |
|---|---|
| Total Number Of Spots (Original File)) | 25835345 |
| Total Number Of Bases (Original File) | 1317602595 |
| Average Read Length | 51 |
| Original File Size (Mb) | 376 |
| Experiment Id | SRX8349996 |
| Library Strategy | OTHER |
| Library Selection | other |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina HiSeq 2500 |
| Sra Project Accession (Srp) | SRP261884 |
| Pubmed Id | 35353581 |
| Sample | SRS6666613 |
| Biosample | SAMN14933914 |
| Sample Type | simple |
| Organism Taxid | 10090 |
| Organism | Mus musculus |
| Sample Name | GSM4556253 |
| Center Name | GEO |
| Submission | SRA1075991 |
| Month | 4 |
| Year | 2022 |
| Author | Li |
| Sample Source | Embryonic stem cells |
| Sample Title | eif4a2_RPF_KD_rep1 |
| Library-Type | Ribo-Seq |
| Replicate-Number | 1.0 |
| Condition | KD |
| Tissue | Embryo |
| Cell-Line | mESC |
| Strain | 129S4/SvJae |
| Plasmid | eIF4A2 shRNA |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR11798519 | Mus musculus | Embryonic stem cells | mESC | Ribo-Seq |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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