SRR11853179 (PRJNA634994)
Processing Status: Failed
General Details
| Sample Name | Hippocampal_Neurons_harringtonine_150s |
|---|---|
| Organism | Rattus norvegicus |
| Release Date | 6/2021 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 82279841 |
|---|---|
| Total Bases | 4278551732 |
| Total Bases | 4278551732 |
Repository Details
| SRA | SRR11853179 |
|---|---|
| ENA | SRR11853179 |
| BioProject | PRJNA634994 |
Experiment Details
| Title | Ribosome profiling |
|---|
Sample Details
| Run Accession | SRR11853179 |
|---|---|
| Total Number Of Spots (Original File)) | 82279841 |
| Total Number Of Bases (Original File) | 4278551732 |
| Average Read Length | 52 |
| Original File Size (Mb) | 1283 |
| Experiment Id | SRX8403281 |
| Library Name | Hippocampal_Neurons_harringtonine_150s_03 |
| Library Strategy | RNA-Seq |
| Library Selection | cDNA |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | NextSeq 500 |
| Sra Project Accession (Srp) | SRP264878 |
| Pubmed Id | <NA> |
| Sample | SRS6715859 |
| Biosample | SAMN15014703 |
| Sample Type | simple |
| Organism Taxid | 10116 |
| Organism | Rattus norvegicus |
| Sample Name | Hippocampal_Neurons_harringtonine_150s |
| Center Name | Max-Planck Institute for Brain Research |
| Submission | SRA1080095 |
| Month | 6 |
| Year | 2021 |
| Author | 0.0 |
| Sample Source | 0.0 |
| Sample Title | Ribosome profiling |
| Library-Type | Ribo-Seq |
| Replicate-Number | 3.0 |
| Condition | Test |
| Inhibitor | Harringtonine |
| Timepoint | NANA |
| Tissue | Brain |
| Cell-Line | neuron |
| Cellular-Compartment | 0.0 |
| Stage | DIV 21 |
| Gene | 0.0 |
| Sex | Mix of male/female |
| Strain | CD (Sprague Dawley) IGS Rat |
| Age | 0.0 |
| Infected | 0.0 |
| Disease | 0.0 |
| Genotype | 0.0 |
| Feeding | 0.0 |
| Temperature | 0.0 |
| Sirna | 0.0 |
| Sgrna | 0.0 |
| Shrna | 0.0 |
| Plasmid | 0.0 |
| Growth-Condition | 0.0 |
| Stress | 0.0 |
| Cancer | 0.0 |
| Microrna | 0.0 |
| Individual | 0.0 |
| Antibody Used | 0.0 |
| Ethnicity | 0.0 |
| Dose | 0.0 |
| Stimulation | 0.0 |
| Host Organism | 0.0 |
| Unique Molecular Identifier (Umi) | 0.0 |
| Adapter Sequence | 0.0 |
| Mode Of Separation | 0.0 |
| Mode Of Rrna Depletion | 0.0 |
| Barcode Information | 0.0 |
| Nucelase Used | 0.0 |
| Kit Used | 0.0 |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR11853179 | Rattus norvegicus | 0.0 | neuron | Ribo-Seq | Harringtonine |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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