SRR11853189 (PRJNA634994)

Processing Status: Failed

General Details

View quality reports

Sample Name Hippocampal_Neurons_harringtonine_30s
Organism Rattus norvegicus
Release Date 6/2021

Sample Links

Run Details

Spots 79639636
Total Bases 4141261072
Total Bases 4141261072

Repository Details

SRA SRR11853189
ENA SRR11853189
BioProject PRJNA634994

Experiment Details

Title Ribosome profiling

Sample Details

Run Accession SRR11853189
Total Number Of Spots (Original File)) 79639636
Total Number Of Bases (Original File) 4141261072
Average Read Length 52
Original File Size (Mb) 1258
Experiment Id SRX8403271
Library Name Hippocampal_Neurons_harringtonine_30s_03
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model NextSeq 500
Sra Project Accession (Srp) SRP264878
Pubmed Id <NA>
Sample SRS6715856
Biosample SAMN15014700
Sample Type simple
Organism Taxid 10116
Organism Rattus norvegicus
Sample Name Hippocampal_Neurons_harringtonine_30s
Center Name Max-Planck Institute for Brain Research
Submission SRA1080095
Month 6
Year 2021
Sample Title Ribosome profiling
Library-Type Ribo-Seq
Replicate-Number 3.0
Inhibitor Harringtonine
Tissue Brain
Cell-Line neuron
Stage DIV 21
Sex Mix of male/female
Strain CD (Sprague Dawley) IGS Rat
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR11853189 Rattus norvegicus neuron Ribo-Seq Harringtonine
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

ⓘ For more Information on the columns shown here see: About