SRR1202290 (PRJNA242520)

Processing Status: Failed

General Details

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Sample Name GSM1356259
Organism Mus musculus
Release Date 7/2014

Sample Links

Run Details

Spots 15497415
Total Bases 436680626
Total Bases 436680626

Repository Details

SRA SRR1202290
ENA SRR1202290
BioProject PRJNA242520

Experiment Details

Title ribosome footprinting B6J;n-Tr20N/N rep1

Sample Details

Run Accession SRR1202290
Total Number Of Spots (Original File)) 15497415
Total Number Of Bases (Original File) 436680626
Average Read Length 28
Original File Size (Mb) 195
Experiment Id SRX498994
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2000
Sra Project Accession (Srp) SRP040502
Pubmed Id 25061210
Sample SRS580623
Biosample SAMN02697288
Sample Type simple
Organism Taxid 10090
Organism Mus musculus
Sample Name GSM1356259
Center Name GEO
Submission SRA148904
Month 7
Year 2014
Author Ishimura
Sample Source ribosome footprinting B6J;n-Tr20N/N
Sample Title ribosome footprinting B6J;n-Tr20N/N rep1
Library-Type Ribo-Seq
Replicate-Number 1.0
Condition Wild Type
Tissue Brain
Strain C57BL/6J
Genotype B6J;n-Tr20N/N
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR1202290 Mus musculus ribosome footprinting B6J;n-Tr20N/N Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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