SRR1202291 (PRJNA242520)

Processing Status: Failed

General Details

View quality reports

Sample Name GSM1356260
Organism Mus musculus
Release Date 7/2014

Sample Links

Run Details

Spots 16162081
Total Bases 471007911
Total Bases 471007911

Repository Details

SRA SRR1202291
ENA SRR1202291
BioProject PRJNA242520

Experiment Details

Title ribosome footprinting B6J;n-Tr20N/N rep2

Sample Details

Run Accession SRR1202291
Total Number Of Spots (Original File)) 16162081
Total Number Of Bases (Original File) 471007911
Average Read Length 29
Original File Size (Mb) 224
Experiment Id SRX498995
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2000
Sra Project Accession (Srp) SRP040502
Pubmed Id 25061210
Sample SRS580624
Biosample SAMN02697289
Sample Type simple
Organism Taxid 10090
Organism Mus musculus
Sample Name GSM1356260
Center Name GEO
Submission SRA148904
Month 7
Year 2014
Author Ishimura
Sample Source ribosome footprinting B6J;n-Tr20N/N
Sample Title ribosome footprinting B6J;n-Tr20N/N rep2
Library-Type Ribo-Seq
Replicate-Number 2.0
Condition Wild Type
Tissue Brain
Strain C57BL/6J
Genotype B6J;n-Tr20N/N
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR1202291 Mus musculus ribosome footprinting B6J;n-Tr20N/N Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

ⓘ For more Information on the columns shown here see: About