SRR12122935 (PRJNA643292)

Processing Status: Completed

General Details

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Sample Name GSM4647809
Organism Homo sapiens
Release Date 7/2020

Sample Links

Run Details

Spots 316706929
Total Bases 16152053379
Total Bases 16152053379

Repository Details

SRA SRR12122935
ENA SRR12122935
BioProject PRJNA643292

Experiment Details

Title replicate_1_ribosome_footprint_raw

Sample Details

Run Accession SRR12122935
Total Number Of Spots (Original File)) 316706929
Total Number Of Bases (Original File) 16152053379
Average Read Length 51
Original File Size (Mb) 5256
Experiment Id SRX8644261
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 4000
Sra Project Accession (Srp) SRP269441
Pubmed Id 32726578
Sample SRS6927973
Biosample SAMN15409185
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name GSM4647809
Center Name GEO
Submission SRA1093200
Month 7
Year 2020
Author Hickey
Sample Source K562-dCas9 cells with GFP non-stop reporter
Sample Title replicate_1_ribosome_footprint_raw
Library-Type Ribo-Seq
Replicate-Number r1
Condition cas9
Inhibitor Cycloheximide
Tissue Bone
Cell-Line K562
Sgrna mixed_mixed
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR12122935 Homo sapiens K562-dCas9 cells with GFP non-stop reporter K562 Ribo-Seq Cycloheximide
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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