SRR12122936 (PRJNA643292)

Processing Status: Completed

General Details

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Sample Name GSM4647810
Organism Homo sapiens
Release Date 7/2020

Sample Links

Run Details

Spots 369393165
Total Bases 18839051415
Total Bases 18839051415

Repository Details

SRA SRR12122936
ENA SRR12122936
BioProject PRJNA643292

Experiment Details

Title replicate_2_ribosome_footprint_raw

Sample Details

Run Accession SRR12122936
Total Number Of Spots (Original File)) 369393165
Total Number Of Bases (Original File) 18839051415
Average Read Length 51
Original File Size (Mb) 6124
Experiment Id SRX8644262
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 4000
Sra Project Accession (Srp) SRP269441
Pubmed Id 32726578
Sample SRS6927974
Biosample SAMN15409184
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name GSM4647810
Center Name GEO
Submission SRA1093200
Month 7
Year 2020
Author Hickey
Sample Source K562-dCas9 cells with GFP non-stop reporter
Sample Title replicate_2_ribosome_footprint_raw
Library-Type Ribo-Seq
Replicate-Number r2
Condition cas9
Inhibitor Cycloheximide
Tissue Bone
Cell-Line K562
Sgrna mixed_mixed
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR12122936 Homo sapiens K562-dCas9 cells with GFP non-stop reporter K562 Ribo-Seq Cycloheximide
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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