SRR12507498 (PRJNA658965)
Processing Status: Completed
General Details
| Sample Name | GSM4743456 |
|---|---|
| Organism | Mus musculus |
| Release Date | 12/2020 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 59118572 |
|---|---|
| Total Bases | 2955928600 |
| Total Bases | 2955928600 |
Repository Details
| SRA | SRR12507498 |
|---|---|
| ENA | SRR12507498 |
| BioProject | PRJNA658965 |
Experiment Details
| Title | RiboSeq_ArfKO_shSCR_replicate_2 |
|---|
Sample Details
| Run Accession | SRR12507498 |
|---|---|
| Total Number Of Spots (Original File)) | 59118572 |
| Total Number Of Bases (Original File) | 2955928600 |
| Average Read Length | 50 |
| Original File Size (Mb) | 904 |
| Experiment Id | SRX8998534 |
| Library Strategy | OTHER |
| Library Selection | other |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina HiSeq 3000 |
| Sra Project Accession (Srp) | SRP278615 |
| Pubmed Id | 33335292 |
| Sample | SRS7251315 |
| Biosample | SAMN15893578 |
| Sample Type | simple |
| Organism Taxid | 10090 |
| Organism | Mus musculus |
| Sample Name | GSM4743456 |
| Center Name | GEO |
| Submission | SRA1116403 |
| Month | 12 |
| Year | 2020 |
| Author | Cottrell |
| Sample Source | embryonic fibroblast |
| Sample Title | RiboSeq_ArfKO_shSCR_replicate_2 |
| Library-Type | Ribo-Seq |
| Condition | Test |
| Tissue | Embryo |
| Cell-Line | Fibroblast |
| Strain | B6.129X1-Cdkn2atm1Cjs/KaiJ |
| Genotype | ArfKO |
| Plasmid | shSCR |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR12507498 | Mus musculus | embryonic fibroblast | Fibroblast | Ribo-Seq |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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